Bioinformatics Tools
Data powers modern biology and medicine
Our software platforms are the solutions you need to aggregate, interrogate, and share data to achieve scientific breakthroughs
End-to-end bioinformatics software tools
Next-generation sequencers generate massive amounts of data. When you have the right bioinformatics tools, you can aggregate this data, interpret it, and socialize the information quickly.
The Illumina software suite offers data solutions that support genomics research and clinical research from setup to analysis. We embrace changing technology and defy the barriers that challenge innovation.
Setting up your infrastructure
Get connected.
Data sharing allows you to publish and collaborate with speed.
Pipeline Setup & Management
Sequencing Experiment Setup
Simplify how you import biological sample information, design and pool libraries, prepare sequencing runs, and much, much more.
See HowSequencing LIMS
Automate workflows, integrate instruments, and manage samples with ease.
Explore the Technologypromo
Additional Bioinformatics Software Content
Harness the Power of Your Data with Illumina Connected Analytics
A robust, enterprise-grade, versatile platform empowering omics workflows, scalability, global compliance, and data science tools.
Connecting Your Multiomics Data with Informatics
In this webinar, bioinformatics experts discuss multiomics dataset integration challenges, tools used, the impact of multiomic data integration on research, and more.
Cloud-Based Solutions for Genomic Data Storage
Learn how cloud-based genomic data solutions can store, process, and share large NGS and genomic datasets with greater speed, scalability, and security.
DRAGEN Shines at precision FDA Truth Challenge
“Informatics is a key component of the All of Us research project and with all the recent advancements in our software, we have never been more confident that DRAGEN is primed for the task ahead.”
Susan Tousi, Chief Product Officer
Multi-omics Data Solutions
Illumina Connected Analytics breaks down the barriers of data silos by delivering versatile and integrated data science tools that enable high-volume automated multi-omics workflows and operations.
Learn MoreSequencing Data Analysis
Our sequencers come equipped with primary data analysis tools built in. For secondary analysis, our bioinformatics tools align and assemble DNA and RNA fragments to fully sequence a sample so that genetic variants can be determined quickly and effectively.
Learn MoreBiological Interpretation
Bioinformatics software and biological data mining drive insights into fundamental biological processes and the causes of genetic disease. Use our tools to interpret biological variants, understand population data, and employ focused sequencing applications for drug discovery, cancer research, single-cell analysis, and more.
Learn MoreEnd-to-End Solutions
Our software ecosystem provides solutions that span across workflows. From specific applications to secondary and tertiary analysis, our seamless software portfolio enables you to hit development milestones faster.
Panel Design
Sample & Workflow Management
Instrument Run Setup & Management
Genomics Run & Monitoring
Secondary Data Analysis
Data Management & Collaboration
Interpretation & Case Reporting
Translational Research
Lab Workbench
| Panel Design | Sample & Workflow Management | Instrument Run Setup & Management | Genomics Run & Monitoring |
|---|---|---|---|
Data Workbench
| Secondary Data Analysis | Data Management & Collaboration | Interpretation & Case Reprting | Translational Research | ||||
|---|---|---|---|---|---|---|---|
Our Community of Researchers and Developers
Get API, application, and developer documentation as well as access to binary downloads and installers so that you can collaborate with other developers and have conversation to make the most of your data.
Online Community
A collaborative space to exchange ideas, tips, and techniques to empower your data analysis and interpretation. Learn More
Skip to a topic:
DRAGEN, Instrument, Informatics, New to NGS, Microarray, General Topics
Open Source Apps
Access high-quality, freely available software designed by trusted Illumina engineers and partners. Learn More
Events
Access APIs to subscribe to platform events and specify delivery targets for receiving.
Developer Portal
Direct access to developer resources for next-generation sequencing, analysis, and data science.
Visit PortalHelp Documentation
Learn how to get started, read about our native apps, SDKs and sample apps, developer tools, and more.
Support
Find documentation, FAQs, technical bulletins, training, software downloads, and other resources in our Support Center.
Downloads
Product files and installable software for use with Illumina products.
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Featured Bioinformatics Tools
Illumina Connected Analytics
A robust, enterprise-grade platform that empowers multi-omics workflows, on-demand scalability, and integrated data science tools.
TruSight Software Suite
This software as a service (SaaS) analytics solution integrates with BaseSpace Sequence Hub and is compatible with systems used for rare disease research.
DRAGEN
The Illumina DRAGEN (Dynamic Read Analysis for GENomics) Bio-IT Platform provides accurate, ultra-rapid secondary genomic analysis of sequencing data.
BaseSpace Sequence Hub
Data management and simplified bioinformatics for labs getting started and for rapidly scaling next-generation sequencing operations.
BaseSpace Clarity LIMS
This laboratory information management system helps genomics labs track samples, manage workflows, and automate routine tasks.